CURRENT PREPRINTS
RECENT PUBLICATIONS
The Tomato Brown Rugose Fruit Virus Movement Protein Gene Is a Novel Microbial Source Tracking Marker
Natarajan, Fremin, Bhatt, Boehm, et al. Applied and Environmental Microbiology. 2023
Phage-inclusive profiling of human gut microbiomes with Phanta
Pinto, Chakraborty, et al. Nature Biotechnology. 2023
Antimicrobial exposure is associated with decreased survival in triple-negative breast cancer
Ransohoff, Ritter, Purington, Andrade, Han, Liu, John, Telli, Schapira, Itakura, Sledge, Bhatt, Kurian, et al. Nature Communications. 2023
Quantifying bias introduced by sample collection in relative and absolute microbiome measurements
Maghini, Dvorak, et al. Nature Biotechnology. 2022
Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genome
Durrant, Fanton, Tycko, et al. Nature Biotechnology. 2022
Near-fatal Legionella pneumonia in a neonate linked to home humidifier by metagenomic next generation sequencing
West, Brooks et al. Med 2022
Gastrointestinal symptoms and fecal shedding of SARS-CoV-2 RNA suggest prolonged gastrointestinal infection
Natarajan, Zlitni, Brooks, Vance et al. Med 2022
Rare transmission of commensal and pathogenic bacteria in the gut microbiome of hospitalized adults
Siranosian et al. Nature Comm. 2022
Standardized preservation, extraction and quantification techniques for detection of fecal SARS-CoV-2 RNA
Natarajan, A., Han, A. et al. Nat Commun. 2021
doi: 10.1038/s41467-021-25576-6.
Complete, closed bacterial genomes from microbiomes using nanopore sequencing
Moss, Maghini, and Bhatt, Nature Biotechnology, 2020
Find our protocol details here.
A Bioinformatic Analysis of Integrative Mobile Genetic Elements Highlights Their Role in Bacterial Adaptation
Durrant et al, Cell Host & Microbe, 2018
Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes
Sberro, et al. Cell, 2019
Precision identification of diverse bloodstream pathogens in the gut microbiome
Tamburini, Andermann et al, Nature Medicine 2018
High-quality genome sequences of uncultured microbes by assembly of read clouds
Bishara, Moss et al, Nature Biotech, 2018
REVIEWS
Surveying Gut Microbiome Research in Africans
Brewster, Tamburini, Asiimwe, Oduaran, Hazelhurst & Bhatt, Trends in Microbiology 2019
Microbiome genome structure drives function
Durrant & Bhatt, Nature Microbiology, 2019